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Homer 3 BIDS-snirf compatible release

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Meryem Yücel
Posts: 133
Admin
Topic starter
(@mayucel)
Estimable Member
Joined: 2 years ago

The Homer release compatible with BIDS & snirf: v1.54, to download

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David Boas
Posts: 237
(@dboas)
Reputable Member
Joined: 2 years ago

Note that our next priority is to have Homer read the events.tsv file in BIDS to make it easy for users to modify their stimulation onset marks without having to modify the snirf file. We are working on this right now and hope to complete it soon.

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Edouard Delaire
Posts: 1
(@edelaire)
New Member
Joined: 2 weeks ago

Hello, 

I tried to update Homer and open the audio dataset, but run into an error (see homer log).

Edouard 

 

 

November 12, 2022, 23:50:49

Running Homer3, (v1.54.0), R2021b
Running Utils, (Last Rev: 2022-10-25 11:12:31), R2021b
Running DataTree, (Last Rev: 2022-10-25 11:12:31), R2021b
arg 1: '/Users/edelaire1/Downloads/FRESH-Audio/'
arg 2: '.snirf'

============
SYSTEM INFO:
============
Platform Arch : MACI64
RAM Total : Not available on this platform
RAM Free : Not available on this platform
HD Space Total : 994.7 GB
HD Space Free : 331.9 GB


MainGUI: November 12, 2022, 23:50:53 - Will load group folder #1 - /Users/edelaire1/Downloads/FRESH-Audio/

Current GroupClass version 2.0.0

DataTreeClass.FindAndLoadGroups: Searching for data files. Please wait ...


DataTreeClass.PrintDatasetFormat: Found non-standard but BIDS-like data set (format #9) with 17 data files in 34 folders files.

Current GroupClass version 2.0.0

----------------------------------------------
ERROR: Not enough input arguments.
Current Folder : /Users/edelaire1/Downloads/FRESH-Audio/
Call stack:
Error in FuncRegClass.m > FuncRegClass.GetIdx (line 193)
Error in FuncRegClass.m > FuncRegClass.GetUsageStrDecorated (line 395)
Error in ProcStreamClass.m > ProcStreamClass.fcallStrEncodedSess (line 1355)
Error in ProcStreamClass.m > ProcStreamClass.CreateDefault (line 1244)
Error in ProcStreamClass.m > ProcStreamClass.ProcStreamClass (line 39)
Error in RunClass.m > RunClass.RunClass (line 48)
Error in DataTreeClass.m > DataTreeClass.AcqData2Group (line 428)
Error in DataTreeClass.m > DataTreeClass.LoadGroup (line 365)
Error in DataTreeClass.m > DataTreeClass.FindAndLoadGroups (line 272)
Error in DataTreeClass.m > DataTreeClass.DataTreeClass (line 83)
Error in LoadDataTree.m > LoadDataTree (line 50)
Error in MainGUI.m > MainGUI_OpeningFcn (line 245)
Error in gui_mainfcn.m > gui_mainfcn (line 220)
Error in MainGUI.m > MainGUI (line 19)
Error in Homer3.m > Homer3 (line 58)
----------------------------------------------

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Meryem Yücel
Posts: 133
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Topic starter
(@mayucel)
Estimable Member
Joined: 2 years ago

@edelaire, this should be MATLAB version incompatibility issue. You have 2021b. I am able to open the dataset with 2019b without any issue. 

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Jay Dubb
Posts: 4
(@jdubb)
New Member
Joined: 2 years ago

Meryem,

where can I access the dataset?

Jay

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