Hello,
I am trying to follow the lesson from day5 (tCCA), specifically Dataset II->DEMO (files available here: https://www.dropbox.com/s/6tn231i1izcx48f/DATASET_II.zip?dl=0 ).
The issue I have is that I cannot display stats from the baseline-HRF comparison (see https://youtu.be/P9PLkqhRZE0?t=5108 )
After succesfully running the group analysis in Homer (my output looks identical to the plot probes of the lesson)
And hmrG_t_paired_baseline_HRF is being used
However, when I type the following:
displayStats('DEMO.mat', 1, 0.05, 0)
I get the error:
Error using matlab.internal.tabular.private.varNamesDim.makeValidName (line 498) 'Source#' is not a valid variable name.
I am using MATLAB R2017b under Windows 10 Pro and Homer version is 1.32.3
I would appreciate any help
Thank you
Edgar
Problem solved on R2017b, I'll share in cas it is helpful to somebody:
I just had to remove the # character from the variables names when creating a table, in lines 27 and 45 of displayStats.m to the following:
L27
T = array2table([ml(lst_thresh,1), ml(lst_thresh,2), tval(lst_thresh)', output.misc.hmrstatsG_contrast.pval(Hb,lst_thresh)']...
,'VariableNames',{'Source','Detector','tval','pval'});
L45
T = array2table([ml(lst_thresh,1), ml(lst_thresh,2), tval(lst_thresh)', output.misc.hmrstatsG_base_cond.pval(Hb,lst_thresh)']...
,'VariableNames',{'Source','Detector','tval','pval'});
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