Hi all,
I have been experimenting using various motion corrections for my data and when trying to use the wavelet motion correction a message pops up saying the function cannot be ran. See image. The error message says to include the Intensity_to_Delta_OD function as it is a prerequisite for the wavelet function, but I already have that as part of the processing pipeline as you can see in the image. This error persisted even if I clicked 'Continue anyway' and when running the processing stream simply did not apply any wavelet correction. It also persisted if I re-added the intensity to OD function to the pipeline or restarted Matlab or Homer3.
I am using Matlab 2021a on a windows PC with the newest version of Homer3. No other motion corrections resulted in any issues.
Thanks in advance for any advice.
-Nathan
Hi Nathan,
The prerequisite error is being raised by mistake-- I will look into fixing this.
By pressing Continue, though, you are allowing the function to run. If it is not applying any correction, you are using the incorrect parameters.
@sstucker Thanks Stephen, I'll have another look at the parameters I was using. Cheers! 🙂
Hi Nathan and Stephen,
I am running into a similar problem with the wavelet correction. It lets me run the analysis but then it freezes and the error message “DWT Extension Mode: Periodization” keeps coming in my command window (top image). I have to forcefully cancel in order to exit from it.
I checked the parameters and I am using the default parameters (bottom image). I tried to run it after changing the iqr value too but it kept giving the same error as above.
I am running MATLAB 2020b on Mac with Homer3. I have tried different motion correct options on the same file(different copies) and haven’t run into any problems.
Nathan- were you able to remedy this?
Hi, I am running into the same problem. Have you found a solution to it?
I am running MATLAB R2019A on Win with Homer3 v1.33.0.
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